Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.85■□□□□ 0.77
CTNNA1P35221 NOC2LP2-201ENST00000407594 1944 ntBASIC19.85■□□□□ 0.77
CTNNA1P35221 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CTNNA1P35221 HLA-L-209ENST00000420110 1011 ntBASIC19.85■□□□□ 0.77
CTNNA1P35221 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.85■□□□□ 0.77
CTNNA1P35221 KRT17P3-201ENST00000420566 1262 ntBASIC19.85■□□□□ 0.77
CTNNA1P35221 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.85■□□□□ 0.77
CTNNA1P35221 AC026366.1-201ENST00000488803 879 ntBASIC19.85■□□□□ 0.77
CTNNA1P35221 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.85■□□□□ 0.77
CTNNA1P35221 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTNNA1P35221 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CTNNA1P35221 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.85■□□□□ 0.77
CTNNA1P35221 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNNA1P35221 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNNA1P35221 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CTNNA1P35221 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTNNA1P35221 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTNNA1P35221 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CTNNA1P35221 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNNA1P35221 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTNNA1P35221 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNNA1P35221 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNNA1P35221 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNNA1P35221 Z85996.1-201ENST00000494644 937 ntBASIC19.84■□□□□ 0.77
CTNNA1P35221 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNNA1P35221 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNNA1P35221 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.83■□□□□ 0.77
CTNNA1P35221 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNNA1P35221 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNNA1P35221 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNNA1P35221 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
CTNNA1P35221 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNNA1P35221 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.83■□□□□ 0.77
CTNNA1P35221 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNNA1P35221 RNA5SP413-201ENST00000516373 109 ntBASIC19.83■□□□□ 0.77
CTNNA1P35221 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CTNNA1P35221 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.83■□□□□ 0.77
CTNNA1P35221 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNNA1P35221 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNNA1P35221 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.83■□□□□ 0.76
CTNNA1P35221 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.83■□□□□ 0.76
CTNNA1P35221 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CTNNA1P35221 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNNA1P35221 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.82■□□□□ 0.76
CTNNA1P35221 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNNA1P35221 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNNA1P35221 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms