Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.84□□□□□ -0.19
CKS2P33552 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 GNAS-203ENST00000306120 1878 ntBASIC13.84□□□□□ -0.19
CKS2P33552 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CKS2P33552 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CKS2P33552 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CKS2P33552 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CKS2P33552 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
CKS2P33552 AC104417.2-201ENST00000562989 1793 ntBASIC13.83□□□□□ -0.19
CKS2P33552 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.83□□□□□ -0.19
CKS2P33552 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.83□□□□□ -0.19
CKS2P33552 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.83□□□□□ -0.2
CKS2P33552 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.83□□□□□ -0.2
CKS2P33552 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CKS2P33552 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 AC126763.1-201ENST00000552015 2118 ntBASIC13.83□□□□□ -0.2
CKS2P33552 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.83□□□□□ -0.2
CKS2P33552 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 UBE2DNL-204ENST00000602536 740 ntBASIC13.83□□□□□ -0.2
CKS2P33552 AC016405.3-201ENST00000607710 860 ntBASIC13.83□□□□□ -0.2
CKS2P33552 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.83□□□□□ -0.2
CKS2P33552 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.83□□□□□ -0.2
CKS2P33552 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CKS2P33552 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CKS2P33552 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.82□□□□□ -0.2
CKS2P33552 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.82□□□□□ -0.2
CKS2P33552 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 YBX1P1-201ENST00000445822 960 ntBASIC13.82□□□□□ -0.2
CKS2P33552 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CKS2P33552 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CKS2P33552 MYCNOS-205ENST00000641950 531 ntBASIC13.82□□□□□ -0.2
CKS2P33552 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CKS2P33552 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CKS2P33552 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CKS2P33552 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms