Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL109659.2-201ENST00000606809 1674 ntBASIC19.33■□□□□ 0.68
ERCC2P18074 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ERCC2P18074 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.32■□□□□ 0.68
ERCC2P18074 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.32■□□□□ 0.68
ERCC2P18074 INGX-201ENST00000359239 846 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
ERCC2P18074 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.32■□□□□ 0.68
ERCC2P18074 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 AP003041.3-201ENST00000527151 707 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 EGLN1P1-201ENST00000531623 762 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.32■□□□□ 0.68
ERCC2P18074 NAPSB-206ENST00000562112 1266 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 AC116562.4-202ENST00000641738 218 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ERCC2P18074 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 AL357033.4-201ENST00000617703 1807 ntBASIC19.32■□□□□ 0.68
ERCC2P18074 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ERCC2P18074 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.32■□□□□ 0.68
ERCC2P18074 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.31■□□□□ 0.68
ERCC2P18074 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.31■□□□□ 0.68
ERCC2P18074 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.31■□□□□ 0.68
ERCC2P18074 AC007663.1-201ENST00000438948 1240 ntBASIC19.31■□□□□ 0.68
ERCC2P18074 MCCD1P1-208ENST00000445732 328 ntBASIC19.31■□□□□ 0.68
ERCC2P18074 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.31■□□□□ 0.68
ERCC2P18074 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.31■□□□□ 0.68
ERCC2P18074 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC2P18074 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.31■□□□□ 0.68
ERCC2P18074 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ERCC2P18074 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC2P18074 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ERCC2P18074 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC2P18074 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERCC2P18074 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.3■□□□□ 0.68
ERCC2P18074 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ERCC2P18074 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.3■□□□□ 0.68
ERCC2P18074 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC2P18074 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC2P18074 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC2P18074 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.3■□□□□ 0.68
ERCC2P18074 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERCC2P18074 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.3■□□□□ 0.68
ERCC2P18074 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ERCC2P18074 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ERCC2P18074 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ERCC2P18074 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERCC2P18074 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.29■□□□□ 0.68
ERCC2P18074 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.29■□□□□ 0.68
ERCC2P18074 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.29■□□□□ 0.68
ERCC2P18074 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms