Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT3P12035 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KRT3P12035 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
KRT3P12035 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
KRT3P12035 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT3P12035 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.8■□□□□ 0.76
KRT3P12035 CRYGFP-201ENST00000418459 633 ntBASIC19.8■□□□□ 0.76
KRT3P12035 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT3P12035 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT3P12035 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
KRT3P12035 AC068587.9-201ENST00000641814 219 ntBASIC19.8■□□□□ 0.76
KRT3P12035 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT3P12035 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT3P12035 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
KRT3P12035 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT3P12035 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT3P12035 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT3P12035 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT3P12035 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT3P12035 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 SNORA78-201ENST00000459373 127 ntBASIC19.79■□□□□ 0.76
KRT3P12035 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT3P12035 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT3P12035 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
KRT3P12035 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT3P12035 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KRT3P12035 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT3P12035 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT3P12035 ANO7L1-203ENST00000602586 1720 ntBASIC19.79■□□□□ 0.76
KRT3P12035 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KRT3P12035 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
KRT3P12035 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT3P12035 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 UNC93B2-201ENST00000285383 730 ntBASIC19.78■□□□□ 0.76
KRT3P12035 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.78■□□□□ 0.76
KRT3P12035 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.78■□□□□ 0.76
KRT3P12035 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT3P12035 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
KRT3P12035 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT3P12035 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT3P12035 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT3P12035 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT3P12035 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.77■□□□□ 0.76
KRT3P12035 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 AC020763.4-201ENST00000623414 4170 ntBASIC19.77■□□□□ 0.76
KRT3P12035 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT3P12035 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KRT3P12035 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KRT3P12035 RBM17P1-201ENST00000453646 1190 ntBASIC19.77■□□□□ 0.76
KRT3P12035 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
KRT3P12035 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT3P12035 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
KRT3P12035 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.77■□□□□ 0.76
KRT3P12035 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT3P12035 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms