Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
FAM228BP0C875 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
FAM228BP0C875 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.06■□□□□ 0.8
FAM228BP0C875 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.06■□□□□ 0.8
FAM228BP0C875 NOC2LP2-201ENST00000407594 1944 ntBASIC20.06■□□□□ 0.8
FAM228BP0C875 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
FAM228BP0C875 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
FAM228BP0C875 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FAM228BP0C875 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM228BP0C875 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.05■□□□□ 0.8
FAM228BP0C875 AC068880.1-201ENST00000507289 2297 ntBASIC20.05■□□□□ 0.8
FAM228BP0C875 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.05■□□□□ 0.8
FAM228BP0C875 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FAM228BP0C875 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 HTR7P1-201ENST00000538670 1336 ntBASIC20.04■□□□□ 0.8
FAM228BP0C875 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 KSR1P1-201ENST00000446298 240 ntBASIC20.04■□□□□ 0.8
FAM228BP0C875 AP002982.1-201ENST00000492365 877 ntBASIC20.04■□□□□ 0.8
FAM228BP0C875 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.04■□□□□ 0.8
FAM228BP0C875 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.04■□□□□ 0.8
FAM228BP0C875 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
FAM228BP0C875 AL357033.4-201ENST00000617703 1807 ntBASIC20.04■□□□□ 0.8
FAM228BP0C875 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM228BP0C875 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
FAM228BP0C875 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FAM228BP0C875 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FAM228BP0C875 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 AC008040.2-201ENST00000461049 708 ntBASIC20.03■□□□□ 0.8
FAM228BP0C875 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.03■□□□□ 0.8
FAM228BP0C875 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FAM228BP0C875 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.03■□□□□ 0.8
FAM228BP0C875 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
FAM228BP0C875 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.03■□□□□ 0.8
FAM228BP0C875 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 AIRN-201ENST00000601203 4374 ntBASIC20.03■□□□□ 0.8
FAM228BP0C875 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM228BP0C875 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms