Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
CYP3A4P08684 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.15■□□□□ 0.98
CYP3A4P08684 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.14■□□□□ 0.98
CYP3A4P08684 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CYP3A4P08684 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CYP3A4P08684 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CYP3A4P08684 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP3A4P08684 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.14■□□□□ 0.97
CYP3A4P08684 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.14■□□□□ 0.97
CYP3A4P08684 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.14■□□□□ 0.97
CYP3A4P08684 LINC01238-205ENST00000567549 1107 ntBASIC21.14■□□□□ 0.97
CYP3A4P08684 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.14■□□□□ 0.97
CYP3A4P08684 NTF6B-201ENST00000591913 560 ntBASIC21.14■□□□□ 0.97
CYP3A4P08684 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CYP3A4P08684 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CYP3A4P08684 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.14■□□□□ 0.97
CYP3A4P08684 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CYP3A4P08684 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CYP3A4P08684 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.13■□□□□ 0.97
CYP3A4P08684 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
CYP3A4P08684 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CYP3A4P08684 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.13■□□□□ 0.97
CYP3A4P08684 KRT18P38-201ENST00000449496 1282 ntBASIC21.13■□□□□ 0.97
CYP3A4P08684 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.13■□□□□ 0.97
CYP3A4P08684 KRT18P35-201ENST00000510488 1269 ntBASIC21.13■□□□□ 0.97
CYP3A4P08684 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CYP3A4P08684 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.13■□□□□ 0.97
CYP3A4P08684 AL445228.2-201ENST00000605589 952 ntBASIC21.13■□□□□ 0.97
CYP3A4P08684 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 AC093525.10-201ENST00000625130 1569 ntBASIC21.13■□□□□ 0.97
CYP3A4P08684 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CYP3A4P08684 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.13■□□□□ 0.97
CYP3A4P08684 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CYP3A4P08684 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.13■□□□□ 0.97
CYP3A4P08684 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CYP3A4P08684 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CYP3A4P08684 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.12■□□□□ 0.97
CYP3A4P08684 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CYP3A4P08684 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.12■□□□□ 0.97
CYP3A4P08684 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CYP3A4P08684 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.12■□□□□ 0.97
CYP3A4P08684 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CYP3A4P08684 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 AC092647.4-201ENST00000457211 535 ntBASIC21.11■□□□□ 0.97
CYP3A4P08684 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CYP3A4P08684 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.11■□□□□ 0.97
CYP3A4P08684 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
CYP3A4P08684 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CYP3A4P08684 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.11■□□□□ 0.97
CYP3A4P08684 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.1■□□□□ 0.97
CYP3A4P08684 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.1■□□□□ 0.97
CYP3A4P08684 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.1■□□□□ 0.97
CYP3A4P08684 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.1■□□□□ 0.97
CYP3A4P08684 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CYP3A4P08684 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms