Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 AC007663.1-201ENST00000438948 1240 ntBASIC19.05■□□□□ 0.64
HLA-DQB2P05538 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 AC116562.4-202ENST00000641738 218 ntBASIC19.05■□□□□ 0.64
HLA-DQB2P05538 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB2P05538 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 AC087499.1-201ENST00000418141 1075 ntBASIC19.04■□□□□ 0.64
HLA-DQB2P05538 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 EGLN1P1-201ENST00000531623 762 ntBASIC19.04■□□□□ 0.64
HLA-DQB2P05538 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 AL499627.1-201ENST00000569373 2188 ntBASIC19.04■□□□□ 0.64
HLA-DQB2P05538 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB2P05538 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 WIZP1-201ENST00000531444 2299 ntBASIC19.03■□□□□ 0.64
HLA-DQB2P05538 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB2P05538 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.02■□□□□ 0.64
HLA-DQB2P05538 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB2P05538 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 AC036111.1-201ENST00000533973 1582 ntBASIC19.02■□□□□ 0.63
HLA-DQB2P05538 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQB2P05538 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQB2P05538 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms