Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT6AP02538 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
KRT6AP02538 AC005082.1-201ENST00000413042 2259 ntBASIC18.21■□□□□ 0.51
KRT6AP02538 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT6AP02538 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
KRT6AP02538 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT6AP02538 RPS2P4-201ENST00000476944 856 ntBASIC18.21■□□□□ 0.51
KRT6AP02538 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 KRT16P1-201ENST00000399124 1418 ntBASIC18.21■□□□□ 0.51
KRT6AP02538 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KRT6AP02538 HEIH-201ENST00000623091 1652 ntBASIC18.21■□□□□ 0.51
KRT6AP02538 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT6AP02538 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT6AP02538 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.21■□□□□ 0.5
KRT6AP02538 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
KRT6AP02538 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 AC004951.3-201ENST00000418645 1148 ntBASIC18.2■□□□□ 0.5
KRT6AP02538 RPPH1-201ENST00000516869 333 ntBASIC18.2■□□□□ 0.5
KRT6AP02538 AC026271.3-201ENST00000571884 352 ntBASIC18.2■□□□□ 0.5
KRT6AP02538 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT6AP02538 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT6AP02538 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT6AP02538 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRT6AP02538 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT6AP02538 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT6AP02538 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 AC091390.4-202ENST00000476426 537 ntBASIC18.19■□□□□ 0.5
KRT6AP02538 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.19■□□□□ 0.5
KRT6AP02538 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT6AP02538 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
KRT6AP02538 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT6AP02538 MIR4651-201ENST00000582622 73 ntBASIC18.19■□□□□ 0.5
KRT6AP02538 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT6AP02538 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.19■□□□□ 0.5
KRT6AP02538 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT6AP02538 AL031985.4-201ENST00000642138 673 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms