Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 AL357033.4-201ENST00000617703 1807 ntBASIC20.2■□□□□ 0.82
HLA-DRAP01903 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 ANO7L1-203ENST00000602586 1720 ntBASIC20.19■□□□□ 0.82
HLA-DRAP01903 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 AC133561.5-201ENST00000635547 218 ntBASIC20.19■□□□□ 0.82
HLA-DRAP01903 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DRAP01903 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DRAP01903 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HLA-DRAP01903 AC145285.6-201ENST00000604632 637 ntBASIC20.18■□□□□ 0.82
HLA-DRAP01903 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DRAP01903 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DRAP01903 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 AC036111.1-201ENST00000533973 1582 ntBASIC20.17■□□□□ 0.82
HLA-DRAP01903 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.17■□□□□ 0.82
HLA-DRAP01903 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 MIR3180-5-201ENST00000583743 153 ntBASIC20.17■□□□□ 0.82
HLA-DRAP01903 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 KRT18P22-201ENST00000402024 1347 ntBASIC20.17■□□□□ 0.82
HLA-DRAP01903 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DRAP01903 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DRAP01903 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 CR769767.2-201ENST00000622735 460 ntBASIC20.16■□□□□ 0.82
HLA-DRAP01903 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DRAP01903 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DRAP01903 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 MIR564-202ENST00000385049 94 ntBASIC20.15■□□□□ 0.82
HLA-DRAP01903 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 AC012306.2-201ENST00000609350 630 ntBASIC20.15■□□□□ 0.82
HLA-DRAP01903 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms