Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IFNA1P01562 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IFNA1P01562 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.88□□□□□ -0.03
IFNA1P01562 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.88□□□□□ -0.03
IFNA1P01562 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.88□□□□□ -0.03
IFNA1P01562 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.88□□□□□ -0.03
IFNA1P01562 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 AC027682.1-201ENST00000562846 899 ntBASIC14.88□□□□□ -0.03
IFNA1P01562 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.88□□□□□ -0.03
IFNA1P01562 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IFNA1P01562 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.88□□□□□ -0.03
IFNA1P01562 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.88□□□□□ -0.03
IFNA1P01562 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
IFNA1P01562 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 AC124067.4-201ENST00000519691 2379 ntBASIC14.87□□□□□ -0.03
IFNA1P01562 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.87□□□□□ -0.03
IFNA1P01562 SLC7A5P1-201ENST00000568957 537 ntBASIC14.87□□□□□ -0.03
IFNA1P01562 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
IFNA1P01562 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.87□□□□□ -0.03
IFNA1P01562 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
IFNA1P01562 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IFNA1P01562 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.87□□□□□ -0.03
IFNA1P01562 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 FEM1AP3-201ENST00000403722 1741 ntBASIC14.86□□□□□ -0.03
IFNA1P01562 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
IFNA1P01562 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
IFNA1P01562 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
IFNA1P01562 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
IFNA1P01562 AL354811.1-201ENST00000610286 706 ntBASIC14.86□□□□□ -0.03
IFNA1P01562 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 AC018553.1-201ENST00000616682 1458 ntBASIC14.86□□□□□ -0.03
IFNA1P01562 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
IFNA1P01562 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
IFNA1P01562 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IFNA1P01562 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
IFNA1P01562 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms