Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
CLDN1O95832 AC092720.2-201ENST00000602388 1665 ntBASIC16.76■□□□□ 0.27
CLDN1O95832 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
CLDN1O95832 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 CHCHD2P8-201ENST00000429873 447 ntBASIC16.76■□□□□ 0.27
CLDN1O95832 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN1O95832 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN1O95832 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN1O95832 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.76■□□□□ 0.27
CLDN1O95832 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 LINC01711-201ENST00000598340 967 ntBASIC16.76■□□□□ 0.27
CLDN1O95832 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLDN1O95832 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN1O95832 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN1O95832 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLDN1O95832 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN1O95832 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN1O95832 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN1O95832 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 AL162377.1-201ENST00000618844 1793 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN1O95832 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN1O95832 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN1O95832 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 KRT18P31-201ENST00000506277 1292 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 AP000867.3-201ENST00000524675 377 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN1O95832 MIR4674-201ENST00000582457 87 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN1O95832 BX640515.1-201ENST00000617215 977 ntBASIC16.75■□□□□ 0.27
CLDN1O95832 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN1O95832 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN1O95832 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 HLA-A-201ENST00000376802 1334 ntBASIC16.74■□□□□ 0.27
CLDN1O95832 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 AL590627.1-203ENST00000421194 1026 ntBASIC16.74■□□□□ 0.27
CLDN1O95832 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 AC092183.1-201ENST00000469884 875 ntBASIC16.74■□□□□ 0.27
CLDN1O95832 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN1O95832 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN1O95832 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN1O95832 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN1O95832 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms