Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.8■□□□□ 0.6
APBB3O95704 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
APBB3O95704 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.8■□□□□ 0.6
APBB3O95704 AL160237.2-201ENST00000556165 472 ntBASIC18.8■□□□□ 0.6
APBB3O95704 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.8■□□□□ 0.6
APBB3O95704 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.8■□□□□ 0.6
APBB3O95704 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
APBB3O95704 Z83836.1-201ENST00000624605 1642 ntBASIC18.8■□□□□ 0.6
APBB3O95704 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 TREX1-205ENST00000625293 1783 ntBASIC18.8■□□□□ 0.6
APBB3O95704 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APBB3O95704 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
APBB3O95704 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
APBB3O95704 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.79■□□□□ 0.6
APBB3O95704 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.79■□□□□ 0.6
APBB3O95704 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
APBB3O95704 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.79■□□□□ 0.6
APBB3O95704 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
APBB3O95704 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.79■□□□□ 0.6
APBB3O95704 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 AC104819.1-201ENST00000504587 486 ntBASIC18.79■□□□□ 0.6
APBB3O95704 KRT18P31-201ENST00000506277 1292 ntBASIC18.79■□□□□ 0.6
APBB3O95704 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.79■□□□□ 0.6
APBB3O95704 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.79■□□□□ 0.6
APBB3O95704 AC090616.6-201ENST00000582640 721 ntBASIC18.79■□□□□ 0.6
APBB3O95704 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.79■□□□□ 0.6
APBB3O95704 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.79■□□□□ 0.6
APBB3O95704 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.79■□□□□ 0.6
APBB3O95704 AC010240.3-201ENST00000607688 395 ntBASIC18.79■□□□□ 0.6
APBB3O95704 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.79■□□□□ 0.6
APBB3O95704 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APBB3O95704 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.78■□□□□ 0.6
APBB3O95704 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
APBB3O95704 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
APBB3O95704 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
APBB3O95704 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APBB3O95704 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.78■□□□□ 0.6
APBB3O95704 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.78■□□□□ 0.6
APBB3O95704 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 AC104390.1-201ENST00000555663 520 ntBASIC18.78■□□□□ 0.6
APBB3O95704 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
APBB3O95704 AC104692.2-201ENST00000603054 253 ntBASIC18.78■□□□□ 0.6
APBB3O95704 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.78■□□□□ 0.6
APBB3O95704 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.78■□□□□ 0.6
APBB3O95704 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.78■□□□□ 0.6
APBB3O95704 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APBB3O95704 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.78■□□□□ 0.6
APBB3O95704 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
APBB3O95704 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 HOXB1-202ENST00000577092 1414 ntBASIC18.77■□□□□ 0.6
APBB3O95704 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
APBB3O95704 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
APBB3O95704 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.77■□□□□ 0.6
APBB3O95704 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.77■□□□□ 0.6
APBB3O95704 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APBB3O95704 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.77■□□□□ 0.6
APBB3O95704 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms