Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.84■□□□□ 0.61
GPC4O75487 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
GPC4O75487 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPC4O75487 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
GPC4O75487 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
GPC4O75487 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC4O75487 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
GPC4O75487 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPC4O75487 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
GPC4O75487 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 MIR718-201ENST00000390190 70 ntBASIC18.83■□□□□ 0.6
GPC4O75487 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC4O75487 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.83■□□□□ 0.6
GPC4O75487 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
GPC4O75487 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.83■□□□□ 0.6
GPC4O75487 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.83■□□□□ 0.6
GPC4O75487 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GPC4O75487 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GPC4O75487 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPC4O75487 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GPC4O75487 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GPC4O75487 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GPC4O75487 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.82■□□□□ 0.6
GPC4O75487 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.82■□□□□ 0.6
GPC4O75487 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPC4O75487 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GPC4O75487 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 RCC2P6-201ENST00000526625 1557 ntBASIC18.81■□□□□ 0.6
GPC4O75487 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 MESTP1-201ENST00000404287 994 ntBASIC18.81■□□□□ 0.6
GPC4O75487 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GPC4O75487 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC4O75487 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GPC4O75487 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPC4O75487 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms