Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HCN1O60741 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.56■□□□□ 0.4
HCN1O60741 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.56■□□□□ 0.4
HCN1O60741 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.56■□□□□ 0.4
HCN1O60741 AP005242.2-201ENST00000580065 1175 ntBASIC17.56■□□□□ 0.4
HCN1O60741 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HCN1O60741 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HCN1O60741 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 TEX21P-204ENST00000641479 1693 ntBASIC17.55■□□□□ 0.4
HCN1O60741 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.55■□□□□ 0.4
HCN1O60741 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.55■□□□□ 0.4
HCN1O60741 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 AL161938.1-201ENST00000569833 2180 ntBASIC17.55■□□□□ 0.4
HCN1O60741 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
HCN1O60741 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.55■□□□□ 0.4
HCN1O60741 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HCN1O60741 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCN1O60741 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HCN1O60741 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HCN1O60741 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.54■□□□□ 0.4
HCN1O60741 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.54■□□□□ 0.4
HCN1O60741 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.54■□□□□ 0.4
HCN1O60741 AC011506.1-201ENST00000474329 610 ntBASIC17.54■□□□□ 0.4
HCN1O60741 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.54■□□□□ 0.4
HCN1O60741 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.54■□□□□ 0.4
HCN1O60741 AC130371.2-201ENST00000619443 611 ntBASIC17.54■□□□□ 0.4
HCN1O60741 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.54■□□□□ 0.4
HCN1O60741 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
HCN1O60741 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HCN1O60741 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCN1O60741 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms