Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
FOXD2O60548 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXD2O60548 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
FOXD2O60548 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXD2O60548 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 SPDYE13P-201ENST00000445314 798 ntBASIC18.88■□□□□ 0.61
FOXD2O60548 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXD2O60548 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 AC106795.1-205ENST00000512851 1056 ntBASIC18.88■□□□□ 0.61
FOXD2O60548 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXD2O60548 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FOXD2O60548 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 BX119927.1-201ENST00000636596 1552 ntBASIC18.88■□□□□ 0.61
FOXD2O60548 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXD2O60548 TMEM179-206ENST00000616017 1645 ntBASIC18.88■□□□□ 0.61
FOXD2O60548 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXD2O60548 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXD2O60548 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXD2O60548 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 TSPY19P-201ENST00000418461 509 ntBASIC18.87■□□□□ 0.61
FOXD2O60548 TSPY18P-201ENST00000441642 509 ntBASIC18.87■□□□□ 0.61
FOXD2O60548 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXD2O60548 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.87■□□□□ 0.61
FOXD2O60548 MIR3180-1-201ENST00000580374 94 ntBASIC18.87■□□□□ 0.61
FOXD2O60548 MIR3180-3-201ENST00000584616 94 ntBASIC18.87■□□□□ 0.61
FOXD2O60548 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXD2O60548 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 AC016734.2-201ENST00000624325 1377 ntBASIC18.87■□□□□ 0.61
FOXD2O60548 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
FOXD2O60548 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXD2O60548 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
FOXD2O60548 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXD2O60548 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXD2O60548 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXD2O60548 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
FOXD2O60548 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXD2O60548 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
FOXD2O60548 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXD2O60548 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXD2O60548 KRT8P26-201ENST00000534154 1276 ntBASIC18.86■□□□□ 0.61
FOXD2O60548 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.86■□□□□ 0.61
FOXD2O60548 AC091304.2-201ENST00000564639 760 ntBASIC18.86■□□□□ 0.61
FOXD2O60548 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms