Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDB2O43679 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDB2O43679 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 AL499627.1-201ENST00000569373 2188 ntBASIC18.78■□□□□ 0.6
LDB2O43679 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB2O43679 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.78■□□□□ 0.6
LDB2O43679 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 SLC25A1P2-201ENST00000430693 912 ntBASIC18.78■□□□□ 0.6
LDB2O43679 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LDB2O43679 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.78■□□□□ 0.6
LDB2O43679 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
LDB2O43679 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LDB2O43679 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB2O43679 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB2O43679 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB2O43679 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB2O43679 MIR4674-201ENST00000582457 87 ntBASIC18.77■□□□□ 0.6
LDB2O43679 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB2O43679 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.77■□□□□ 0.6
LDB2O43679 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LDB2O43679 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.77■□□□□ 0.6
LDB2O43679 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LDB2O43679 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.77■□□□□ 0.59
LDB2O43679 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
LDB2O43679 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 AC104581.1-202ENST00000635932 2618 ntBASIC18.76■□□□□ 0.59
LDB2O43679 KRT8P9-201ENST00000558927 1449 ntBASIC18.76■□□□□ 0.59
LDB2O43679 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDB2O43679 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.76■□□□□ 0.59
LDB2O43679 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
LDB2O43679 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB2O43679 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB2O43679 AL353719.1-201ENST00000566847 864 ntBASIC18.76■□□□□ 0.59
LDB2O43679 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB2O43679 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB2O43679 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB2O43679 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB2O43679 AC009113.1-201ENST00000570267 2443 ntBASIC18.76■□□□□ 0.59
LDB2O43679 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 AC005082.1-201ENST00000413042 2259 ntBASIC18.76■□□□□ 0.59
LDB2O43679 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB2O43679 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 AC092338.2-201ENST00000568827 1415 ntBASIC18.75■□□□□ 0.59
LDB2O43679 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.75■□□□□ 0.59
LDB2O43679 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LDB2O43679 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.75■□□□□ 0.59
LDB2O43679 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.75■□□□□ 0.59
LDB2O43679 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB2O43679 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB2O43679 CYP2D8P-201ENST00000433633 1490 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms