Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.25■□□□□ 0.51
UBFD1O14562 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.25■□□□□ 0.51
UBFD1O14562 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UBFD1O14562 AC091390.4-202ENST00000476426 537 ntBASIC18.25■□□□□ 0.51
UBFD1O14562 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 AC131212.4-201ENST00000623606 975 ntBASIC18.25■□□□□ 0.51
UBFD1O14562 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.25■□□□□ 0.51
UBFD1O14562 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.25■□□□□ 0.51
UBFD1O14562 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UBFD1O14562 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
UBFD1O14562 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.24■□□□□ 0.51
UBFD1O14562 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
UBFD1O14562 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBFD1O14562 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 AL357033.4-201ENST00000617703 1807 ntBASIC18.24■□□□□ 0.51
UBFD1O14562 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBFD1O14562 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
UBFD1O14562 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.24■□□□□ 0.51
UBFD1O14562 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 PRSS44-201ENST00000515154 1146 ntBASIC18.24■□□□□ 0.51
UBFD1O14562 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.24■□□□□ 0.51
UBFD1O14562 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.24■□□□□ 0.51
UBFD1O14562 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
UBFD1O14562 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.24■□□□□ 0.51
UBFD1O14562 AC073648.6-201ENST00000641589 218 ntBASIC18.24■□□□□ 0.51
UBFD1O14562 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
UBFD1O14562 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.24■□□□□ 0.51
UBFD1O14562 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBFD1O14562 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.23■□□□□ 0.51
UBFD1O14562 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
UBFD1O14562 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.23■□□□□ 0.51
UBFD1O14562 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 AC067852.2-201ENST00000590513 2313 ntBASIC18.23■□□□□ 0.51
UBFD1O14562 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.23■□□□□ 0.51
UBFD1O14562 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.23■□□□□ 0.51
UBFD1O14562 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
UBFD1O14562 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBFD1O14562 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBFD1O14562 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBFD1O14562 AL162741.1-201ENST00000565563 1558 ntBASIC18.22■□□□□ 0.51
UBFD1O14562 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.22■□□□□ 0.51
UBFD1O14562 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
UBFD1O14562 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
UBFD1O14562 AC008040.2-201ENST00000461049 708 ntBASIC18.22■□□□□ 0.51
UBFD1O14562 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.22■□□□□ 0.51
UBFD1O14562 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBFD1O14562 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBFD1O14562 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
UBFD1O14562 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms