Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00473A8K010 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 AC091390.4-202ENST00000476426 537 ntBASIC15.31■□□□□ 0.04
LINC00473A8K010 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 PRSS44-201ENST00000515154 1146 ntBASIC15.31■□□□□ 0.04
LINC00473A8K010 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.31■□□□□ 0.04
LINC00473A8K010 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.31■□□□□ 0.04
LINC00473A8K010 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.31■□□□□ 0.04
LINC00473A8K010 AL353708.3-201ENST00000610272 989 ntBASIC15.31■□□□□ 0.04
LINC00473A8K010 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 HTR7P1-201ENST00000538670 1336 ntBASIC15.31■□□□□ 0.04
LINC00473A8K010 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 AL133373.2-201ENST00000623187 2828 ntBASIC15.31■□□□□ 0.04
LINC00473A8K010 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC00473A8K010 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LINC00473A8K010 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LINC00473A8K010 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00473A8K010 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00473A8K010 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00473A8K010 AC026471.1-201ENST00000564629 3026 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00473A8K010 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LINC00473A8K010 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00473A8K010 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC00473A8K010 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00473A8K010 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00473A8K010 AP002982.1-201ENST00000492365 877 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00473A8K010 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC00473A8K010 KRT8P32-201ENST00000512863 1461 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC00473A8K010 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00473A8K010 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00473A8K010 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00473A8K010 AC005332.8-201ENST00000622750 2735 ntBASIC15.3■□□□□ 0.04
LINC00473A8K010 NOC2LP1-202ENST00000452600 2235 ntBASIC15.29■□□□□ 0.04
LINC00473A8K010 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00473A8K010 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00473A8K010 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00473A8K010 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00473A8K010 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00473A8K010 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00473A8K010 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00473A8K010 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00473A8K010 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00473A8K010 KRT8P3-201ENST00000519669 1449 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms