Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00862A6NCI5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 KRT16P6-202ENST00000425692 1426 ntBASIC15.28■□□□□ 0.04
LINC00862A6NCI5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 AC137630.3-201ENST00000607245 391 ntBASIC15.28■□□□□ 0.04
LINC00862A6NCI5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINC00862A6NCI5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 HYMAI-201ENST00000635591 3347 ntBASIC15.27■□□□□ 0.04
LINC00862A6NCI5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.27■□□□□ 0.04
LINC00862A6NCI5 AC241377.3-202ENST00000626088 1088 ntBASIC15.27■□□□□ 0.04
LINC00862A6NCI5 AC241585.3-202ENST00000628937 1088 ntBASIC15.27■□□□□ 0.04
LINC00862A6NCI5 AC245100.8-202ENST00000629247 1058 ntBASIC15.27■□□□□ 0.04
LINC00862A6NCI5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINC00862A6NCI5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 TCAF2P1-201ENST00000291129 2421 ntBASIC15.26■□□□□ 0.03
LINC00862A6NCI5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 RARRES2P2-201ENST00000394842 485 ntBASIC15.26■□□□□ 0.03
LINC00862A6NCI5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 FLJ13224-201ENST00000313737 1514 ntBASIC15.26■□□□□ 0.03
LINC00862A6NCI5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.26■□□□□ 0.03
LINC00862A6NCI5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00862A6NCI5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms