Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 KRT17P3-201ENST00000420566 1262 ntBASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 KRT8P32-201ENST00000512863 1461 ntBASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV9S1A1TA0A576 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 AL355802.2-201ENST00000402069 882 ntBASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV9S1A1TA0A576 AC067852.2-201ENST00000590513 2313 ntBASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 KRT16P5-201ENST00000455284 522 ntBASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 AL023875.1-201ENST00000640777 796 ntBASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCRBV9S1A1TA0A576 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 KRASP1-201ENST00000407852 552 ntBASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 AC026366.1-201ENST00000488803 879 ntBASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 AL445675.2-201ENST00000620291 557 ntBASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms