Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 AC073210.2-201ENST00000430369 194 ntBASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 RAP2CP1-201ENST00000605103 478 ntBASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-1A0A0B4J241 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 YBX1P10-201ENST00000444752 975 ntBASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 AL121906.2-201ENST00000621597 723 ntBASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-1A0A0B4J241 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 FEM1AP3-201ENST00000403722 1741 ntBASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms