Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 AC099398.1-201ENST00000567919 2776 ntBASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV13-2A0A0B4J235 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 AC018553.1-201ENST00000616682 1458 ntBASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAV13-2A0A0B4J235 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 AC106820.2-201ENST00000563775 3264 ntBASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 AC124067.4-201ENST00000519691 2379 ntBASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.4□□□□□ -0.43
TRAV13-2A0A0B4J235 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms