Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 AC093525.10-201ENST00000625130 1569 ntBASIC17.79■□□□□ 0.44
GPC6Q9Y625 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 FEM1AP3-201ENST00000403722 1741 ntBASIC17.79■□□□□ 0.44
GPC6Q9Y625 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 NBPF21P-201ENST00000425093 1451 ntBASIC17.79■□□□□ 0.44
GPC6Q9Y625 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 AC139713.2-201ENST00000641328 2723 ntBASIC17.79■□□□□ 0.44
GPC6Q9Y625 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GPC6Q9Y625 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
GPC6Q9Y625 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 AC004264.1-201ENST00000608354 794 ntBASIC17.78■□□□□ 0.44
GPC6Q9Y625 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.78■□□□□ 0.44
GPC6Q9Y625 AL023875.1-201ENST00000640777 796 ntBASIC17.78■□□□□ 0.44
GPC6Q9Y625 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 AL031598.1-201ENST00000561511 1773 ntBASIC17.78■□□□□ 0.44
GPC6Q9Y625 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 AC099398.1-201ENST00000567919 2776 ntBASIC17.78■□□□□ 0.44
GPC6Q9Y625 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC6Q9Y625 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GPC6Q9Y625 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC6Q9Y625 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC6Q9Y625 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms