Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SATB2Q9UPW6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SATB2Q9UPW6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SATB2Q9UPW6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.54
SATB2Q9UPW6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SATB2Q9UPW6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AL450487.1-201ENST00000426799 995 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 KRT18P38-201ENST00000449496 1282 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 PRSS44-201ENST00000515154 1146 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AC069148.1-201ENST00000608741 768 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AC008622.2-201ENST00000617006 1229 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 AC116407.4-201ENST00000623319 1061 ntBASIC18.39■□□□□ 0.53
SATB2Q9UPW6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.39■□□□□ 0.53
SATB2Q9UPW6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 VENTXP5-201ENST00000523979 775 ntBASIC18.38■□□□□ 0.53
SATB2Q9UPW6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 CKBP1-201ENST00000565489 1086 ntBASIC18.38■□□□□ 0.53
SATB2Q9UPW6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 KRT8P45-201ENST00000414328 1447 ntBASIC18.38■□□□□ 0.53
SATB2Q9UPW6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SATB2Q9UPW6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SATB2Q9UPW6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms