Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 AC004408.2-201ENST00000623613 2777 ntBASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 HMGA1P5-201ENST00000412453 271 ntBASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 MIR3180-5-201ENST00000583743 153 ntBASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 CR769767.2-201ENST00000622735 460 ntBASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA4Q9UN74 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 AC036111.1-201ENST00000533973 1582 ntBASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHA4Q9UN74 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 KRT8P45-201ENST00000414328 1447 ntBASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 ANO7L1-203ENST00000602586 1720 ntBASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 MIR564-202ENST00000385049 94 ntBASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 WWOX-216ENST00000569818 525 ntBASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 AC120498.9-201ENST00000339021 3867 ntBASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
PCDHA4Q9UN74 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 SLC25A3P1-201ENST00000443844 931 ntBASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
PCDHA4Q9UN74 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHA4Q9UN74 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms