Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL162412.1-201ENST00000567129 965 ntBASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 AC100791.3-201ENST00000617619 330 ntBASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MYCNOS-205ENST00000641950 531 ntBASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
COMMD3Q9UBI1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 AL031432.3-201ENST00000607698 485 ntBASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 SIRPAP1-201ENST00000448467 1770 ntBASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COMMD3Q9UBI1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 CROCCP1-201ENST00000426910 5675 ntBASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.55■□□□□ 0.24
COMMD3Q9UBI1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.54■□□□□ 0.24
COMMD3Q9UBI1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms