Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRFN1Q9P244 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRFN1Q9P244 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 MIR3180-5-201ENST00000583743 153 ntBASIC17.27■□□□□ 0.36
LRFN1Q9P244 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 AL121956.5-201ENST00000625261 221 ntBASIC17.27■□□□□ 0.36
LRFN1Q9P244 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRFN1Q9P244 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.27■□□□□ 0.36
LRFN1Q9P244 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRFN1Q9P244 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRFN1Q9P244 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.27■□□□□ 0.35
LRFN1Q9P244 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.27■□□□□ 0.35
LRFN1Q9P244 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.27■□□□□ 0.35
LRFN1Q9P244 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.27■□□□□ 0.35
LRFN1Q9P244 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.27■□□□□ 0.35
LRFN1Q9P244 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRFN1Q9P244 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 KRT18P38-201ENST00000449496 1282 ntBASIC17.26■□□□□ 0.35
LRFN1Q9P244 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRFN1Q9P244 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 AFG3L1P-217ENST00000557444 2447 ntBASIC17.26■□□□□ 0.35
LRFN1Q9P244 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRFN1Q9P244 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.25■□□□□ 0.35
LRFN1Q9P244 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 STARP1-201ENST00000397973 869 ntBASIC17.25■□□□□ 0.35
LRFN1Q9P244 AC112907.2-201ENST00000448639 330 ntBASIC17.25■□□□□ 0.35
LRFN1Q9P244 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.25■□□□□ 0.35
LRFN1Q9P244 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRFN1Q9P244 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
LRFN1Q9P244 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRFN1Q9P244 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.24■□□□□ 0.35
LRFN1Q9P244 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms