Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 KRT17P3-201ENST00000420566 1262 ntBASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 POM121L13P-201ENST00000422362 380 ntBASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AC233263.1-201ENST00000578059 224 ntBASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AC006058.3-201ENST00000606217 1069 ntBASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 AC090340.1-201ENST00000620778 4980 ntBASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ABCF3Q9NUQ8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 AC116351.2-201ENST00000606540 1585 ntBASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ABCF3Q9NUQ8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 FAM201B-201ENST00000458407 597 ntBASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 AL121906.2-201ENST00000621597 723 ntBASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ABCF3Q9NUQ8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms