Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.66■□□□□ 0.1
LIN7CQ9NUP9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 AC133681.1-201ENST00000465482 601 ntBASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 KRT18P16-201ENST00000510337 1294 ntBASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 AL023875.1-201ENST00000640777 796 ntBASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 NBPF21P-201ENST00000425093 1451 ntBASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LIN7CQ9NUP9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 KRASP1-201ENST00000407852 552 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 TUBB8P6-201ENST00000436895 1288 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RPPH1-201ENST00000516869 333 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ANO7L1-203ENST00000602586 1720 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 AC004264.1-201ENST00000608354 794 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 AC124016.1-201ENST00000609552 612 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 FAM197Y4-202ENST00000622692 608 ntBASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIN7CQ9NUP9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms