Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TLR9Q9NR96 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.94■□□□□ 0.78
TLR9Q9NR96 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TLR9Q9NR96 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 FOSL1P1-201ENST00000511041 816 ntBASIC19.94■□□□□ 0.78
TLR9Q9NR96 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TLR9Q9NR96 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TLR9Q9NR96 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TLR9Q9NR96 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.94■□□□□ 0.78
TLR9Q9NR96 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 AL160237.2-201ENST00000556165 472 ntBASIC19.93■□□□□ 0.78
TLR9Q9NR96 AC104692.2-201ENST00000603054 253 ntBASIC19.93■□□□□ 0.78
TLR9Q9NR96 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TLR9Q9NR96 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TLR9Q9NR96 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 TCF3P1-201ENST00000423021 1937 ntBASIC19.92■□□□□ 0.78
TLR9Q9NR96 Z83836.1-201ENST00000624605 1642 ntBASIC19.92■□□□□ 0.78
TLR9Q9NR96 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 KRT18P23-201ENST00000435622 1283 ntBASIC19.92■□□□□ 0.78
TLR9Q9NR96 KRT18P31-201ENST00000506277 1292 ntBASIC19.92■□□□□ 0.78
TLR9Q9NR96 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 KRT8P7-201ENST00000533003 1432 ntBASIC19.92■□□□□ 0.78
TLR9Q9NR96 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TLR9Q9NR96 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
TLR9Q9NR96 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 AL109659.2-201ENST00000606809 1674 ntBASIC19.91■□□□□ 0.78
TLR9Q9NR96 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 AC079781.3-201ENST00000449110 356 ntBASIC19.91■□□□□ 0.78
TLR9Q9NR96 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.91■□□□□ 0.78
TLR9Q9NR96 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.91■□□□□ 0.78
TLR9Q9NR96 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TLR9Q9NR96 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
TLR9Q9NR96 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TLR9Q9NR96 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms