Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 CYP21A1P-202ENST00000354927 1481 ntBASIC17.11■□□□□ 0.33
HMG20AQ9NP66 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 AC134043.2-201ENST00000624206 2238 ntBASIC17.11■□□□□ 0.33
HMG20AQ9NP66 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 AC011270.2-201ENST00000624293 2550 ntBASIC17.1■□□□□ 0.33
HMG20AQ9NP66 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 AC016405.3-201ENST00000607710 860 ntBASIC17.1■□□□□ 0.33
HMG20AQ9NP66 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 AL356652.1-201ENST00000615962 565 ntBASIC17.1■□□□□ 0.33
HMG20AQ9NP66 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.1■□□□□ 0.33
HMG20AQ9NP66 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 AC006015.1-201ENST00000429970 570 ntBASIC17.09■□□□□ 0.33
HMG20AQ9NP66 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.09■□□□□ 0.33
HMG20AQ9NP66 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HMG20AQ9NP66 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMG20AQ9NP66 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms