Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 RCC2P6-201ENST00000526625 1557 ntBASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEUROD4Q9HD90 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 HEIH-201ENST00000623091 1652 ntBASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEUROD4Q9HD90 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 AC090164.3-201ENST00000610780 2143 ntBASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEUROD4Q9HD90 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 AC073195.1-201ENST00000607241 877 ntBASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 AC073912.3-201ENST00000624414 853 ntBASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 BCL2-203ENST00000589955 5011 ntBASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.76■□□□□ 0.43
NEUROD4Q9HD90 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 KRT8P3-201ENST00000519669 1449 ntBASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NEUROD4Q9HD90 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms