Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 GPAT2P1-201ENST00000444924 1672 ntBASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 AP000525.1-201ENST00000608286 694 ntBASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.06■□□□□ 0.96
CCSER1Q9C0I3 AC008556.1-201ENST00000610908 2040 ntBASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 AC009113.1-201ENST00000570267 2443 ntBASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 AC005082.1-201ENST00000413042 2259 ntBASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCSER1Q9C0I3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 KRT8P45-201ENST00000414328 1447 ntBASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 AC090164.3-201ENST00000610780 2143 ntBASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 SLC25A1P2-201ENST00000430693 912 ntBASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 AL499627.1-201ENST00000569373 2188 ntBASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 AC073592.3-201ENST00000625118 1834 ntBASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.04■□□□□ 0.96
CCSER1Q9C0I3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 KRT18P41-201ENST00000518924 1277 ntBASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCSER1Q9C0I3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCSER1Q9C0I3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms