Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 AC091076.1-201ENST00000610741 619 ntBASIC19.25■□□□□ 0.67
CIPCQ9C0C6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.25■□□□□ 0.67
CIPCQ9C0C6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 TEX21P-204ENST00000641479 1693 ntBASIC19.24■□□□□ 0.67
CIPCQ9C0C6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AL023284.2-201ENST00000405850 579 ntBASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.24■□□□□ 0.67
CIPCQ9C0C6 MCCD1P1-208ENST00000445732 328 ntBASIC19.24■□□□□ 0.67
CIPCQ9C0C6 KRT18P38-201ENST00000449496 1282 ntBASIC19.24■□□□□ 0.67
CIPCQ9C0C6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CIPCQ9C0C6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 UPK3BP1-201ENST00000428678 509 ntBASIC19.23■□□□□ 0.67
CIPCQ9C0C6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.23■□□□□ 0.67
CIPCQ9C0C6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 KRT8P3-201ENST00000519669 1449 ntBASIC19.23■□□□□ 0.67
CIPCQ9C0C6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CIPCQ9C0C6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 AC005332.7-201ENST00000614046 2005 ntBASIC19.22■□□□□ 0.67
CIPCQ9C0C6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
CIPCQ9C0C6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CIPCQ9C0C6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.21■□□□□ 0.67
CIPCQ9C0C6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CIPCQ9C0C6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms