Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAF4Q9BUZ4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 AC145285.6-201ENST00000604632 637 ntBASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAF4Q9BUZ4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 AL691432.2-201ENST00000607222 2038 ntBASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 MIR1238-201ENST00000408483 83 ntBASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 YBX1P10-201ENST00000444752 975 ntBASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 MIR6786-201ENST00000616843 113 ntBASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAF4Q9BUZ4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 KRT8P9-201ENST00000558927 1449 ntBASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 AL031985.4-201ENST00000642138 673 ntBASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAF4Q9BUZ4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms