Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RAB40CQ96S21 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB40CQ96S21 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 AC004911.1-201ENST00000416316 871 ntBASIC15.27■□□□□ 0.04
RAB40CQ96S21 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 AC231657.2-201ENST00000624556 255 ntBASIC15.27■□□□□ 0.04
RAB40CQ96S21 AC092437.1-201ENST00000624794 1048 ntBASIC15.27■□□□□ 0.04
RAB40CQ96S21 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB40CQ96S21 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40CQ96S21 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.27■□□□□ 0.03
RAB40CQ96S21 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40CQ96S21 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RAB40CQ96S21 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB40CQ96S21 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40CQ96S21 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 ESPNP-201ENST00000270691 2015 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 AC007322.1-201ENST00000426983 750 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 TSPY21P-201ENST00000433481 731 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 AC005829.2-201ENST00000571422 1056 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 RAP2CP1-201ENST00000605103 478 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 GNAS-203ENST00000306120 1878 ntBASIC15.26■□□□□ 0.03
RAB40CQ96S21 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RAB40CQ96S21 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40CQ96S21 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40CQ96S21 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 AC080038.1-201ENST00000611274 1154 ntBASIC15.25■□□□□ 0.03
RAB40CQ96S21 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40CQ96S21 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms