Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX27Q96L92 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX27Q96L92 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX27Q96L92 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNX27Q96L92 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX27Q96L92 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX27Q96L92 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX27Q96L92 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SNX27Q96L92 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX27Q96L92 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SNX27Q96L92 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX27Q96L92 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX27Q96L92 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX27Q96L92 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX27Q96L92 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX27Q96L92 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX27Q96L92 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX27Q96L92 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX27Q96L92 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX27Q96L92 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX27Q96L92 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX27Q96L92 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SNX27Q96L92 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SNX27Q96L92 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX27Q96L92 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX27Q96L92 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX27Q96L92 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.29■□□□□ 0.84
SNX27Q96L92 AC068587.9-201ENST00000641814 219 ntBASIC20.29■□□□□ 0.84
SNX27Q96L92 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX27Q96L92 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX27Q96L92 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SNX27Q96L92 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX27Q96L92 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.28■□□□□ 0.84
SNX27Q96L92 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SNX27Q96L92 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX27Q96L92 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX27Q96L92 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX27Q96L92 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX27Q96L92 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX27Q96L92 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX27Q96L92 AL049812.1-201ENST00000432563 2267 ntBASIC20.28■□□□□ 0.84
SNX27Q96L92 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SNX27Q96L92 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.27■□□□□ 0.84
SNX27Q96L92 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX27Q96L92 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX27Q96L92 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SNX27Q96L92 AL031133.1-201ENST00000406807 723 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms