Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 TSPY5P-201ENST00000426936 936 ntBASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AC063952.2-201ENST00000498792 1227 ntBASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AC022616.7-201ENST00000525383 220 ntBASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AL441883.1-201ENST00000566170 1045 ntBASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMARCD1Q96GM5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 LINC01238-205ENST00000567549 1107 ntBASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 AC083906.6-201ENST00000641366 219 ntBASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMARCD1Q96GM5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD1Q96GM5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD1Q96GM5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SMARCD1Q96GM5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD1Q96GM5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms