Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.1■□□□□ 0.49
VPS33AQ96AX1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.09■□□□□ 0.49
VPS33AQ96AX1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 AC008687.6-201ENST00000596318 630 ntBASIC18.09■□□□□ 0.49
VPS33AQ96AX1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS33AQ96AX1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.08■□□□□ 0.49
VPS33AQ96AX1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS33AQ96AX1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 TSPY21P-201ENST00000433481 731 ntBASIC18.08■□□□□ 0.48
VPS33AQ96AX1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 AL138781.1-201ENST00000566567 1274 ntBASIC18.08■□□□□ 0.48
VPS33AQ96AX1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS33AQ96AX1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 TSPY23P-201ENST00000440136 739 ntBASIC18.07■□□□□ 0.48
VPS33AQ96AX1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS33AQ96AX1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms