Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTP4A1Q93096 FZD10-202ENST00000539839 3282 ntBASIC16.92■□□□□ 0.3
PTP4A1Q93096 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 RCC2P6-201ENST00000526625 1557 ntBASIC16.91■□□□□ 0.3
PTP4A1Q93096 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 AC068880.1-201ENST00000507289 2297 ntBASIC16.91■□□□□ 0.3
PTP4A1Q93096 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 HEIH-201ENST00000623091 1652 ntBASIC16.91■□□□□ 0.3
PTP4A1Q93096 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.91■□□□□ 0.3
PTP4A1Q93096 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTP4A1Q93096 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 MIR4651-201ENST00000582622 73 ntBASIC16.9■□□□□ 0.3
PTP4A1Q93096 MTDHP1-201ENST00000605323 784 ntBASIC16.9■□□□□ 0.3
PTP4A1Q93096 AC006058.3-201ENST00000606217 1069 ntBASIC16.9■□□□□ 0.3
PTP4A1Q93096 AC069544.1-201ENST00000609399 999 ntBASIC16.9■□□□□ 0.3
PTP4A1Q93096 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 PCDHB18P-201ENST00000524813 2368 ntBASIC16.9■□□□□ 0.3
PTP4A1Q93096 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.9■□□□□ 0.3
PTP4A1Q93096 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTP4A1Q93096 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
PTP4A1Q93096 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTP4A1Q93096 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PTP4A1Q93096 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PTP4A1Q93096 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 AC004264.1-201ENST00000608354 794 ntBASIC16.89■□□□□ 0.29
PTP4A1Q93096 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTP4A1Q93096 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTP4A1Q93096 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.88■□□□□ 0.29
PTP4A1Q93096 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.88■□□□□ 0.29
PTP4A1Q93096 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTP4A1Q93096 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms