Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC31.54■■■□□ 2.64
TOPBP1Q92547 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC31.54■■■□□ 2.64
TOPBP1Q92547 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC31.54■■■□□ 2.64
TOPBP1Q92547 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 GGCT-205ENST00000409436 954 ntTSL 3 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 IRF8-202ENST00000562492 946 ntTSL 3 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 PRKN-208ENST00000610470 531 ntTSL 2 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 PRKN-209ENST00000612485 225 ntTSL 5 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC31.53■■■□□ 2.64
TOPBP1Q92547 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOPBP1Q92547 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOPBP1Q92547 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOPBP1Q92547 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOPBP1Q92547 CCS-201ENST00000310190 942 ntTSL 5 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 IGHV3-22-201ENST00000520721 359 ntBASIC31.52■■■□□ 2.64
TOPBP1Q92547 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TOPBP1Q92547 AL355385.1-201ENST00000606123 409 ntBASIC31.52■■■□□ 2.64
TOPBP1Q92547 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOPBP1Q92547 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
TOPBP1Q92547 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.64
TOPBP1Q92547 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
TOPBP1Q92547 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TOPBP1Q92547 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC31.51■■■□□ 2.64
TOPBP1Q92547 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TOPBP1Q92547 MIR564-202ENST00000385049 94 ntBASIC31.51■■■□□ 2.63
TOPBP1Q92547 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC31.51■■■□□ 2.63
TOPBP1Q92547 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC31.51■■■□□ 2.63
TOPBP1Q92547 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TOPBP1Q92547 AC093909.1-201ENST00000504731 1122 ntBASIC31.51■■■□□ 2.63
TOPBP1Q92547 AC005336.2-201ENST00000593183 939 ntBASIC31.51■■■□□ 2.63
TOPBP1Q92547 AL691403.2-201ENST00000618460 490 ntBASIC31.51■■■□□ 2.63
TOPBP1Q92547 AL355877.3-201ENST00000622820 899 ntBASIC31.51■■■□□ 2.63
TOPBP1Q92547 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC31.51■■■□□ 2.63
TOPBP1Q92547 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOPBP1Q92547 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
TOPBP1Q92547 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC31.5■■■□□ 2.63
TOPBP1Q92547 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC31.5■■■□□ 2.63
TOPBP1Q92547 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC31.5■■■□□ 2.63
TOPBP1Q92547 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TOPBP1Q92547 KATNBL1P6-202ENST00000562413 1466 ntBASIC31.5■■■□□ 2.63
TOPBP1Q92547 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
TOPBP1Q92547 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC31.5■■■□□ 2.63
TOPBP1Q92547 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 PAM16-208ENST00000573553 722 ntTSL 2 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 AL591684.3-201ENST00000605187 298 ntBASIC31.49■■■□□ 2.63
TOPBP1Q92547 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOPBP1Q92547 PMS2P2-201ENST00000425039 1128 ntBASIC31.49■■■□□ 2.63
TOPBP1Q92547 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC31.49■■■□□ 2.63
TOPBP1Q92547 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 TREX1-205ENST00000625293 1783 ntBASIC31.48■■■□□ 2.63
TOPBP1Q92547 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 SCARNA2-201ENST00000458748 420 ntBASIC31.48■■■□□ 2.63
TOPBP1Q92547 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 MIR5100-201ENST00000579544 119 ntBASIC31.48■■■□□ 2.63
TOPBP1Q92547 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 TEX21P-204ENST00000641479 1693 ntBASIC31.48■■■□□ 2.63
TOPBP1Q92547 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC31.48■■■□□ 2.63
TOPBP1Q92547 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOPBP1Q92547 AC034236.2-201ENST00000606662 1610 ntBASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms