Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC139887.4-201ENST00000607877 719 ntBASIC17.76■□□□□ 0.43
TM9SF4Q92544 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TM9SF4Q92544 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
TM9SF4Q92544 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.75■□□□□ 0.43
TM9SF4Q92544 TSPY5P-201ENST00000426936 936 ntBASIC17.75■□□□□ 0.43
TM9SF4Q92544 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.75■□□□□ 0.43
TM9SF4Q92544 AL353719.1-201ENST00000566847 864 ntBASIC17.75■□□□□ 0.43
TM9SF4Q92544 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TM9SF4Q92544 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF4Q92544 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF4Q92544 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 HOMER2P1-201ENST00000455653 964 ntBASIC17.74■□□□□ 0.43
TM9SF4Q92544 YBX1P2-201ENST00000489612 999 ntBASIC17.74■□□□□ 0.43
TM9SF4Q92544 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF4Q92544 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 AC141257.4-201ENST00000634557 245 ntBASIC17.74■□□□□ 0.43
TM9SF4Q92544 AC136944.6-201ENST00000634818 245 ntBASIC17.74■□□□□ 0.43
TM9SF4Q92544 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 AL032819.2-201ENST00000624543 2162 ntBASIC17.74■□□□□ 0.43
TM9SF4Q92544 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.74■□□□□ 0.43
TM9SF4Q92544 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF4Q92544 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TM9SF4Q92544 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 AP000523.1-201ENST00000398242 1049 ntBASIC17.73■□□□□ 0.43
TM9SF4Q92544 UPK3BP1-201ENST00000428678 509 ntBASIC17.73■□□□□ 0.43
TM9SF4Q92544 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 AC140113.3-201ENST00000605663 199 ntBASIC17.73■□□□□ 0.43
TM9SF4Q92544 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TM9SF4Q92544 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TM9SF4Q92544 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms