Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 AC093827.2-201ENST00000512654 315 ntBASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB40AQ8WXH6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB40AQ8WXH6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 ANO7L1-203ENST00000602586 1720 ntBASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.53■□□□□ 0.24
RAB40AQ8WXH6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms