Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 MCRIP2P1-201ENST00000394346 511 ntBASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00308Q8TCZ7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 CROCCP1-201ENST00000426910 5675 ntBASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 AC091305.1-201ENST00000479476 895 ntBASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00308Q8TCZ7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 OR6D1P-203ENST00000641209 4860 ntBASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 TFP1-202ENST00000475455 1573 ntBASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 EDA-201ENST00000338901 1233 ntBASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms