Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SVIPQ8NHG7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.81□□□□□ -0.52
SVIPQ8NHG7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 AC010536.1-201ENST00000538868 2611 ntBASIC11.81□□□□□ -0.52
SVIPQ8NHG7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SVIPQ8NHG7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 AC093010.1-201ENST00000473625 1624 ntBASIC11.8□□□□□ -0.52
SVIPQ8NHG7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SVIPQ8NHG7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 AP003733.4-201ENST00000623785 1697 ntBASIC11.79□□□□□ -0.52
SVIPQ8NHG7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SVIPQ8NHG7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms