Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 MIR3648-2-201ENST00000581792 180 ntBASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 MIR3648-1-201ENST00000615959 180 ntBASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 AC092720.2-201ENST00000602388 1665 ntBASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SPTSSBQ8NFR3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 TCF3P1-201ENST00000423021 1937 ntBASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZNRF2P2-203ENST00000454624 420 ntBASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 AC009831.1-201ENST00000580420 1582 ntBASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 PCDH8P1-201ENST00000428983 2773 ntBASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SPTSSBQ8NFR3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms