Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC068880.1-201ENST00000507289 2297 ntBASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC069152.1-201ENST00000438030 544 ntBASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AL109923.1-201ENST00000618799 583 ntBASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DNAAF1Q8NEP3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 AC142086.2-201ENST00000569753 217 ntBASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 AC008687.6-201ENST00000596318 630 ntBASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DNAAF1Q8NEP3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 TUBB8P6-201ENST00000436895 1288 ntBASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms