Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 HCG4P8-203ENST00000443049 980 ntBASIC20.48■□□□□ 0.87
RNF169Q8NCN4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 AC069148.1-201ENST00000608741 768 ntBASIC20.48■□□□□ 0.87
RNF169Q8NCN4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 TREX1-205ENST00000625293 1783 ntBASIC20.48■□□□□ 0.87
RNF169Q8NCN4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF169Q8NCN4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 AC092597.1-201ENST00000487352 616 ntBASIC20.47■□□□□ 0.87
RNF169Q8NCN4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
RNF169Q8NCN4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 RASA4DP-201ENST00000460726 1199 ntBASIC20.46■□□□□ 0.87
RNF169Q8NCN4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 AC034232.1-201ENST00000506026 1064 ntBASIC20.46■□□□□ 0.87
RNF169Q8NCN4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 MIR3180-5-201ENST00000583743 153 ntBASIC20.46■□□□□ 0.87
RNF169Q8NCN4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.46■□□□□ 0.87
RNF169Q8NCN4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF169Q8NCN4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF169Q8NCN4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.45■□□□□ 0.86
RNF169Q8NCN4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF169Q8NCN4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 KRT18P48-201ENST00000434763 852 ntBASIC20.44■□□□□ 0.86
RNF169Q8NCN4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF169Q8NCN4 KRT8P3-201ENST00000519669 1449 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms