Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21■□□□□ 0.95
USP38Q8NB14 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21■□□□□ 0.95
USP38Q8NB14 AC004408.2-201ENST00000623613 2777 ntBASIC21■□□□□ 0.95
USP38Q8NB14 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21■□□□□ 0.95
USP38Q8NB14 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 FXN-203ENST00000396366 922 ntTSL 2 BASIC21■□□□□ 0.95
USP38Q8NB14 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21■□□□□ 0.95
USP38Q8NB14 KRT18P38-201ENST00000449496 1282 ntBASIC21■□□□□ 0.95
USP38Q8NB14 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21■□□□□ 0.95
USP38Q8NB14 VENTXP5-201ENST00000523979 775 ntBASIC21■□□□□ 0.95
USP38Q8NB14 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
USP38Q8NB14 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21■□□□□ 0.95
USP38Q8NB14 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 AC008622.2-201ENST00000617006 1229 ntBASIC21■□□□□ 0.95
USP38Q8NB14 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21■□□□□ 0.95
USP38Q8NB14 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP38Q8NB14 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.99■□□□□ 0.95
USP38Q8NB14 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.99■□□□□ 0.95
USP38Q8NB14 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.99■□□□□ 0.95
USP38Q8NB14 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
USP38Q8NB14 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.99■□□□□ 0.95
USP38Q8NB14 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
USP38Q8NB14 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
USP38Q8NB14 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.99■□□□□ 0.95
USP38Q8NB14 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.99■□□□□ 0.95
USP38Q8NB14 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP38Q8NB14 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
USP38Q8NB14 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 AL022342.1-201ENST00000400363 863 ntBASIC20.98■□□□□ 0.95
USP38Q8NB14 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.98■□□□□ 0.95
USP38Q8NB14 ATP5G2P1-201ENST00000433580 426 ntBASIC20.98■□□□□ 0.95
USP38Q8NB14 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 KRT17P6-201ENST00000453795 1220 ntBASIC20.98■□□□□ 0.95
USP38Q8NB14 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.98■□□□□ 0.95
USP38Q8NB14 AL441883.1-201ENST00000566170 1045 ntBASIC20.98■□□□□ 0.95
USP38Q8NB14 NEK4P2-201ENST00000580004 1012 ntBASIC20.98■□□□□ 0.95
USP38Q8NB14 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.98■□□□□ 0.95
USP38Q8NB14 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.98■□□□□ 0.95
USP38Q8NB14 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP38Q8NB14 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.98■□□□□ 0.95
USP38Q8NB14 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
USP38Q8NB14 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.97■□□□□ 0.95
USP38Q8NB14 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.97■□□□□ 0.95
USP38Q8NB14 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.97■□□□□ 0.95
USP38Q8NB14 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.97■□□□□ 0.95
USP38Q8NB14 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.97■□□□□ 0.95
USP38Q8NB14 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
USP38Q8NB14 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP38Q8NB14 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.97■□□□□ 0.95
USP38Q8NB14 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.97■□□□□ 0.95
USP38Q8NB14 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP38Q8NB14 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms