Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM42Q8IWZ5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 AC093787.1-201ENST00000450396 207 ntBASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 AL121906.2-201ENST00000621597 723 ntBASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM42Q8IWZ5 PKD1P1-201ENST00000458669 6805 ntBASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM42Q8IWZ5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 TSPY21P-201ENST00000433481 731 ntBASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 TSPY6P-201ENST00000448518 926 ntBASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM42Q8IWZ5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 RPS2P52-201ENST00000469610 820 ntBASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM42Q8IWZ5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms